Bioinformatics Software Engineer (Permanent, France)
Marseille, France
Christophe Chevillard
Deadline for application

Main activities
- Develop, organize and structure “omics” databases, web tools and software, in conjunction with researchers.
- Maintain bioinformatics tools and databases previously developed in the laboratory
- Update biological data contained in databases
- Implement “FAIR” (Easy to Find, Accessible, Interoperable, Reusable) practices for bioinformatics projects
- Communicate results at internal meetings, and write and update documentation associated with the tools and databases developed.

Related activities
- Co-supervise trainees.

- Education Level: Master Degree or equivalent

- Monitor methodological developments
- Identify, analyze and understand needs
- Communication, organization, pedagogy.
- Communicate clearly orally and in writing
- Identify, analyze and understand needs
- Organizational skills
- Rigor and initiative
- Adapt work autonomously to the needs of research programs.
- Good listening skills.
- Share best practices.
- Proficiency in Python, Bash or R programming languages and other bioinformatics tools
- Expertise in tools dedicated to pipeline development (Snakemake)
- Proficiency in NGS processing tools
- Knowledge of web environments based on MVC models (e.g. Django)
- Ability to develop web applications based on R Shiny.
- Ability to work in an interdisciplinary environment (biological, genomic, informatics)
- Good knowledge of English (B2) and French (will be a plus).

More information: (in English) (in French)